© 2002 by The Society for Integrative and Comparative Biology
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Acanthocephalan Phylogeny and the Evolution of Parasitism1
1 Center for Population Biology, University of California, One Shields Ave., Davis, California 95616
| SYNOPSIS |
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The study of parasite evolution relies on the identification of free-living sister taxa of parasitic lineages. Most lineages of parasitic helminths are characterized by an amazing diversity of species that complicates the resolution of phylogenetic relationships. Acanthocephalans offer a potential model system to test various long-standing hypotheses and generalizations regarding the evolution of parasitism in metazoans. The entirely parasitic Acanthocephala have a diversity of species that is manageable with regards to constructing global phylogenetic hypotheses, exhibit variation in hosts and habitats, and are hypothesized to have close phylogenetic affinities to the predominately free-living Rotifera. In this paper, I review and test previous hypotheses of acanthocephalan phylogenetic relationships with analyses of the available 18S rRNA sequence database. Maximum-parsimony and maximum-likelihood inferred trees differ significantly with regard to relationships among acanthocephalans and rotifers. Maximum-parsimony analysis results in a paraphyletic Rotifera, placing a long-branched bdelloid rotifer as the sister taxon of Acanthocephala. Maximum-likelihood analysis results in a monophyletic Rotifera. The difference between the two optimality criteria is attributed to long-branch attraction. The two analyses are congruent in terms of relationships within Acanthocephala. The three sampled classes are monophyletic, and the Archiacanthocephala is the sister taxon of a Palaeacanthocephala + Eoacanthocephala clade. The phylogenetic hypothesis is used to assess the evolution of host and habitat preferences. Acanthocephalan lineages have exhibited multiple radiations into terrestrial habitats and bird and mammal definitive hosts from ancestral aquatic habitats and fish definitive hosts, while exhibiting phylogenetic conservatism in the type of arthropod intermediate host utilized.
| INTRODUCTION |
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Acanthocephala is a small group of obligate parasites that utilize arthropods and vertebrates in a conserved two-host life cycle. The name of the phylum refers to the thorny retractable proboscis that anchors the adult worm to the intestine of the vertebrate host. In addition to the thorny proboscis, acanthocephalans are distinguished morphologically as cylindrical and unsegmented worms. The trunk is a hollow structure that contains the excretory, reproductive, and nervous systems and is filled with psuedocoelomic fluid (Dunagan and Miller, 1991
Acanthocephalans are gonochoristic and invariably utilize arthropods as intermediate hosts and vertebrates as definitive hosts. Occasionally, vertebrates serve as paratenic hosts harboring larval acanthocephalans that do not develop to adults unless ingested by the appropriate vertebrate definitive hosts (Nickol, 1985
). As in many helminth parasites, acanthocephalan life cycles exploit trophic interactions between arthropods and vertebrates, with the initial stages of the life cycle involving ingestion of viable shelled embryos by the arthropod intermediate host. Completion of the life cycle, including reproduction, occurs when an appropriate vertebrate definitive host ingests an infected arthropod intermediate host. For some species, transport or paratenic hosts are required to complete the life cycle.
Traditionally, the taxonomic groups in Acanthocephala have been identified based on morphological features and host characteristics (Bullock, 1969
). In general, there is a large degree of congruence between morphological and molecular phylogenetic hypotheses of Acanthocephala, as well as congruence between phylogenetic hypotheses and traditional taxonomic classifications (Near et al., 1998
; Garcia-Varela et al., 2000
; Monks, 2001
). Phylogenetic investigations of acanthocephalans have used 18S ribosomal RNA (rRNA) sequence data (Near et al., 1998
; Garcia-Varela et al., 2000
) and morphological characters (Monks, 2001
). The molecular phylogenetic analyses result in monophyly for all three sampled acanthocephalan classes (Archiacanthocephala, Palaeacanthocephala, and Eoacanthocephala). However, phylogenetic analysis of 138 morphological characters does not result in monophyly of Archiacanthocephala (Monks, 2001
). Both molecular and morphological analyses support a sister taxon relationship between Palaeacanthocephala and Eoacanthocephala (Near et al., 1998
; Garcia-Varela et al., 2000
; Monks, 2001)
. The 18S rRNA phylogenetic analysis of Garcia-Varela et al. (2000)
and cladistic analysis of morphology in Monks (2001)
does not recover the palaeacanthocephalan order Echinorhynchida as monophyletic; however, this result was not compared to the null hypothesis of echinorhynchid monophyly.
The phylogenetic hypothesis based on 18S rRNA sequence data has been used to examine evolutionary trends of ecological diversification within Acanthocephala. The type of arthropod intermediate hosts used by each acanthocephalan class is conservative and hence diagnostic: Archiacanthocephala utilize myriapods and insects, Palaeacanthocephala utilize malacostracans, and Eoacanthocephala utilize maxillopods (Bullock, 1969
; Schmidt, 1985
; Near et al., 1998
). In contrast, the types of vertebrate definitive hosts utilized by acanthocephalans are not diagnostic for the monophyletic classes. For instance, there have been at least two independent radiations of acanthocephalans into mammals and birds in Archiacanthocephala and Palaeacanthocephala, with an unambiguous ancestral state of fishes as definitive hosts in Palaeacanthocephala (Near et al., 1998
). Eoacanthocephalans primarily use fishes as definitive hosts; however, there is a radiation of Neoechinorhynchus in North American freshwater turtles. Also, within Acanthocephala there have been multiple shifts between aquatic and terrestrial intermediate and definitive hosts (Near et al., 1998
).
The evolution of parasitism is a tantalizing question in evolutionary biology, and in many respects acanthocephalans provide a potential model system to investigate adaptive processes associated with the evolution of parasitism. First, the diversity of acanthocephalans is limited to approximately 1,150 described species (Amin, 1985
). Second, the basic life cycle is highly conserved among all acanthocephalans. Third, substantial phylogenetic evidence from both morphology and molecular data indicates that acanthocephalans have a close evolutionary relationship with Rotifera (Clement, 1985
; Lorenzen, 1985
; Winnepenninckx et al., 1995
; Garey et al., 1998
; Mark Welch, 2000
). The identification of a free-living sister taxon to the entirely parasitic Acanthocephala offers an unprecedented opportunity to study the evolution of obligate parasitism in terms of character innovations versus character loss, evolutionary trends in host and habitat specificity, and adaptive radiation with regard to morphological and ecological diversification (Brooks and McLennan, 1993
).
Phylogenetic hypotheses relating parasitic lineages to a free-living sister taxon allow direct comparisons of characters and features regarded as important in the origin and diversification of parasites. For example, both the Nematoda and Platyhelminthes contain obligate parasites as well as free-living species. Comparison of parasitic and free-living species in these groups is complicated by the very large diversity of species in each of these lineages and the difficulties associated with developing phylogenetic hypotheses for such large groups of organisms. Undaunted by the extensive diversity of species, investigations have attempted to examine the evolution of parasitism in both nematodes (Blaxter et al., 1998
) and platyhelminths (Littlewood et al., 1999
) using phylogenetic hypotheses inferred from rRNA. These studies indicate that animal parasitism has at least four independent origins in the nematodes and a single origin in the platyhelminths. Based on sister taxon comparisons, parasitic lineages within the nematodes seem to be associated with free-living lineages that are bacteriovores (Blaxter et al., 1998
). These conclusions are preliminary, however, as much of the diversity of nematodes (both parasitic and free-living) is absent from the rRNA database, and recovered relationships do not receive appreciable bootstrap pseudoreplicate support. The situation is somewhat different for platyhelminths, where parasitic lineages comprise a monophyletic Neodermata. Identification of the sister group to the Neodermata is complicated by lack of resolution in morphological and rRNA characters. Based on an extensive examination of the available character sets, Littlewood et al. (1999)
conclude that a Fecampiida + Urastomidae clade, or the neoophorans, represent the best candidate lineages that are the sister taxa of the parasitic Neodermata; however, other hypotheses could not be rejected.
Unlike the situation in nematodes and platyhelminths, substantial evidence supports a close phylogenetic affinity of acanthocephalans to the predominately free-living rotifers. Traditionally acanthocephalans were considered to be related to a number of pseudocoelomate animal phyla in the Aschelminthes (Hyman, 1951
; Brusca and Brusca, 1990
). Phylogenetic analysis of 18S rRNA sequences demonstrate, however, that the Aschelminthes is not monophyletic, and among sampled sequences Acanthocephala and Rotifera were recovered as a monophyletic group with substantial branch support (Winnepenninckx, 1995
). Four morphological features have been presented as apomorphies for a monophyletic Rotifera + Acanthocephala clade: (1) syncytial epidermis, (2) intracytoplasmic lamina, (3) sperm cells with flagellum inserted anteriorly, and (4) epidermal cells with apical crypts (Clement, 1985
; Lorenzen, 1985
; Nielsen et al., 1996
; Wallace et al., 1996
; Ahlrichs, 1997
; Garey et al., 1998
; Kristensen and Funch, 2000
). Alrichs (1997)
suggested the name Syndermata for this clade.
An earlier study using morphological evidence hypothesized that Acanthocephala is the sister taxon of the rotifer class Bdelloidea, making Rotifera paraphyletic (Lorenzen, 1985
). This relationship was also recovered in a preliminary analysis of 18S rRNA sequences sampled from two rotifers, one monogonont and one bdelloid, and three acanthocephalans (Garey et al., 1996
). Garey et al. (1996)
proposed the name Lemniscea for this clade. Despite the strong initial support for this relationship from rRNA sequence data, the hypothesis of Lorenzen (1985)
is not popular among rotifer taxonomists, and the validity of the homology assessment of characters designated as apomorphies for a Bdelloidea + Acanthocephala clade has been questioned (Melone et al., 1998
; Ricci, 1998
). In addition to critical examination of the morphological evidence, the monophyly of the Lemniscea was rejected, and a monophyletic Rotifera was recovered in a phylogenetic analysis with expanded taxon sampling of 18S rRNA (Garcia-Varela et al., 2000
). The preliminary analysis of Garey et al. (1996)
used an alignment of 18S rRNA sequences based on the inferred secondary structure model of the molecule. The use of secondary structure models to assess positional homology in rRNA genes is preferred over methods of pairwise similarity-based methods of alignment (Kjer, 1995
). The conclusions of Garcia-Varela et al. (2000)
regarding the monophyly of Rotifera were derived from analyses using dendogram-based similarity alignments that were adjusted by eye. No biologically meaningful criterion (i.e., secondary structure) was presented to justify the 18S rRNA alignments used by Garcia-Varela et al. (2000)
. Additional evidence of non-monophyly of Rotifera has come from phylogenetic analysis of the heat shock protein, hsp82 (Mark Welch, 2000
). Phylogenetic relationships inferred from hsp82 depicted the rotifer class Seisonidea as the sister taxon of a monophyletic trichotomy that included Acanthocephala, Bdelloidea, and Monogononta. Bdelloidea was not recovered as the sister taxon of Acanthocephala (Mark Welch, 2000
). Alternative hypotheses of relationship were not statistically compared to optimal trees using the hsp82 dataset.
The purposes of this study are to reassess relationships among acanthocephalans using an expanded 18S rRNA dataset presented in Garcia-Varela (2000)
, examine alternative phylogenetic hypotheses of acanthocephalan relationships, and use the phylogenetic tree of acanthocephalans to develop hypotheses of evolutionary diversification addressing host and habitat use. In addition, I reexamine the controversy regarding the relationships of acanthocephalans and rotifers using all available 18S rRNA sequences. Specifically, I investigate the power of maximum-parsimony (MP) and maximum-likelihood (ML) analyses of 18S rRNA gene sequences to discriminate among alternative phylogenetic hypotheses.
| MATERIALS AND METHODS |
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Sequences of the 18S rRNA gene of 21 acanthocephalans, 6 rotifers, and several other invertebrate phyla were downloaded from Genbank (Table 1) and added to the secondary structure alignment of Garey et al. (1996)
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MP and ML analyses were executed using PAUP*. For MP analyses, heuristic tree searches were used with tree bisection-reconnection (TBR) branch swapping with 10 random sequence additions. Character states inferred as gaps were treated as missing data. Bootstrap (2,000 pseudoreplications) and decay analyses (Bremer, 1988
Alternative hypotheses of phylogenetic relationships between acanthocephalans and rotifers, and among major lineages of acanthocephalans (Fig. 1) were statistically compared to those recovered from parsimony analyses using the modified Templeton (MT) test (Templeton, 1983
; Felsenstein, 1993
), and maximum-likelihood analysis using the Kishino-Hasegawa (K-H) test (Kishino and Hasegawa, 1989), as executed in PAUP* (Swofford, 2000
). Separate constraint tree searches were used to find the optimal MP and ML trees that depicted the alternative hypotheses in Figure 1.
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The evolutionary diversification of host utilization and host habitats were investigated by optimizing these features onto the MP and ML trees using both ACTRAN and DELTRAN parsimony as executed using MacClade 4.0 (Maddison and Maddison, 2000
| RESULTS |
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Secondary structure-based alignment of the 18S rRNA sequences (Table 1) contained 2,163 nucleotide positions, with 1,029 phylogenetically informative sites for parsimony. Plotting transitions versus transversions did not indicate the presence of multiple substitution (not shown). MP analysis resulted in a single most-parsimonious tree (Fig. 2). Rotifera and Acanthocephala comprise a monophyletic group with high bootstrap pseudoreplicate recovery and decay score (Fig. 2). Similar to the earlier phylogenetic studies using 18S rRNA (Garey et al., 1996
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Most alternative phylogenetic topologies (Fig. 1) are rejected using the MT test (Table 2). Neither of the two alternative topologies relating the three acanthocephalan classes (Fig. 1A and B) are rejected (Table 2). The best trees that depict a monophyletic Echinorhynchida are significantly less parsimonious than the MP topology. The constraint tree search of a monophyletic Rotifera recovers two trees, and neither is significantly different from the MP tree (Table 2). The constraint search of Lemniscea monophyly (Fig. 1D) recovers seven trees, and only one of these trees is significantly different from the MP tree (Table 2).
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The ML tree (Fig. 3) is generally congruent with the MP tree; however, there are important differences (Fig. 2). The inferred phylogenetic relationships between acanthocephalans and rotifers differ appreciably. In the ML analysis, both Rotifera and the two bdelloid species of Philodina are recovered as monophyletic, but both of these clades receive low bootstrap pseudoreplicate scores. Within Acanthocephala the differences between ML and MP in tree topology are restricted to relationships among species in the Archiacanthocephala and Polymorphida. These relationships are not strongly supported, as measured by bootstrap and decay scores, in either analysis (Figs. 2 and 3). All other recovered nodes in the ML tree are congruent with the MP tree, and nodes that were recovered in a high number of bootstrap pseudoreplicates in MP (Fig. 2) were also characterized by high bootstrap scores in the ML analysis (Fig. 3).
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Comparison of alternative hypotheses to the ML tree using the K-H test revealed that all alternative topologies examined (Fig. 1) differed significantly from the ML tree (Table 3). Perhaps most significant, the hypothesis that represents the Lemniscea as monophyletic (Fig. 1D) was rejected (Table 3). The two alternative hypotheses of relationships among the three acanthocephalan classes (Fig. 1A and B) were each significantly less likely than the ML tree (Table 3).
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| DISCUSSION |
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Phylogenetic analyses of 18S rRNA sequences demonstrate significant incongruence between parsimony and likelihood optimality criteria with regard to the relationships between acanthocephalans and rotifers. Parsimony analyses recover a paraphyletic Rotifera, where a bdelloid rotifer and acanthocephalans form a monophyletic clade (Fig. 2). However, incorporation of a model of molecular evolution in likelihood analysis results in a monophyletic Rotifera (Fig. 3). Garcia-Varela et al. (2000)
The recovery of Rotifera as paraphyletic in MP analysis may result from the phenomena of long-branch attraction. Long-branch attraction is especially problematic when more than one lineage exhibits an accelerated rate of evolution and the internal nodes connecting the lineages are relatively short (Felsenstein, 1978
). In both the MP and ML phylograms, P. acuticornis has a much longer terminal branch than the other rotifer species (Figs. 2 and 3). Methods such as ML account for both observed and unobserved changes. The inclusion of taxa that exhibit long-branches does not lead to inconsistency, defined as failure to recover the true tree, because ML uses branch lengths to calculate the probabilities of nucleotide substitution (Hillis et al., 1994
; Swofford et al., 1996
). Long branches may confound MP analyses, ML considers changes along long branches to be more likely than those observed on shorter ones. As a result, ML is often consistent when conditions exist in which MP is expected to be inconsistent (Hillis et al., 1994
; Swofford et al., 1996
).
The 18S rRNA inferred phylogeny provides a framework to investigate the evolutionary diversification of features associated with parasitism in Acanthocephala (Fig. 4). Utilization of arthropod and vertebrate hosts is universal throughout acanthocephalans; however, in a phylogenetic context there are varying degrees of constraint and plasticity of host use. The class of arthropod used as intermediate host is very conserved on the phylogeny. The malacostracans used by palaeacanthocephalans and the maxillopods used by eoacanthocephalans are both included in a monophyletic Crustacea. Relationships among crustaceans are unresolved, but the hypothesized sister taxon of Crustacea is the Uniramia (Wheeler et al., 1993
; Giribet et al., 2001
), which serve as intermediate hosts of the Archiacanthocephala. The general congruence of phylogenetic topologies of acanthocephalans and their arthropod hosts suggests an association of acanthocephalans with the diversification of the major lineages of the Mandibulata (Crustacea, Myriopoda, and Insecta).
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Unlike the conserved use of particular arthropod groups as intermediate hosts, acanthocephalans exhibit wide variation of vertebrate definitive hosts at the species level, as well as when comparing the major lineages. Many acanthocephalan species use a wide variety of vertebrate definitive host species, but some major lineages are confined to specific groups of vertebrate hosts. Mapping definitive hosts on the phylogeny reveals that acanthocephalans have independently invaded bird and mammal hosts in the Archiacanthocephala and the Polymorphida (Fig. 4).
Physiologically, the relationship between early life stage acanthocephalans and their arthropod intermediate hosts is much more invasive than that of later life stages of acanthocephalans and their vertebrate definitive hosts. Early life stages of acanthocephalans actually penetrate the intestinal wall of the arthropod intermediate host and continue development in the body cavity of the intermediate host (Nickol, 1985
), while the later life stages are found in the intestinal lumen of vertebrate definitive hosts and normally do not enter the body cavity. Because of the more intimate relationship between acanthocephalans and their arthropod intermediate hosts, early life stages may be more constrained to the physiological environment of arthropod hosts than later life stages are to the environment of vertebrate hosts. This constraint may limit acanthocephalan lineages to particular arthropod hosts, whereas the use of particular vertebrate hosts may be more free to vary. This model of relative host constraint would be expected to produce the phylogenetic pattern observed when host types are optimized on the acanthocephalan phylogeny (Fig. 4). Conservation of intermediate hosts may be driven by physiological constraint, and independent evolution to similar definitive hosts may be more influenced by trophic interactions among intermediate and definitive hosts.
The evolution of acanthocephalan life cycles is also characterized by shifts between aquatic and terrestrial environments. Unfortunately, the reconstruction of the ancestral state as aquatic or terrestrial for acanthocephalans is equivocal (Fig. 4). The optimization of the ancestral node leading to the Palaeacanthocephala + Eoacanthocephala clade is aquatic (Fig. 4). Within Palaeacanthocephala there is a shift to terrestrial hosts in the polymorphids (Fig. 4). The shift between aquatic and terrestrial hosts in Acanthocephala is probably driven by availability of appropriate arthropod intermediate hosts in the particular habitat. For example, the monophyletic Polymorphida includes hosts that are both aquatic and terrestrial (Fig. 4). Shifts between aquatic and terrestrial habitats were likely promoted by the availability of malacostracans in both terrestrial and aquatic habitats. In contrast to the diversity of habitat utilization in Palaeacanthocephala, all eoacanthocephalans and their intermediate hosts (maxillopod crustaceans) are entirely aquatic. Therefore, the radiation of eoacanthocephalans to terrestrial hosts is prevented by the lack of appropriate intermediate hosts.
The phylogenetic relationships of the Syndermata (Rotifera + Acanthocephala) are not completely resolved. Absent from the 18S rRNA database is a complete sequence for Seison, representing the rotifer class Seisonidea. Sampling this taxon is critical, as morphological evidence has been used to hypothesize that Seison and Acanthocephala are sister taxa (Ahlrichs, 1997
), and that Eurotatoria (Bdelloidea + Monogononta) and Acanthocephala are sister taxa (Kristensen and Funch, 2000
). Both hypotheses result in a paraphyletic Rotifera, but with different rotifer lineages as the sister taxon of Acanthocephala. If Rotifera (Bdelloidea + Monogononta + Seisonidea) is monophyletic and sister to Acanthocephala, then tests of character change associated with the evolution of parasitism rely on an unambiguous identification of the sister taxon to Syndermata.
Resolution of the phylogenetic relationships within the Syndermata, identification of the sister taxon of the Syndermata, increased taxon sampling of the acanthocephalan 18S rRNA database, and optimization of morphological and ecological characters on the phylogeny will provide a critical test of several long-standing hypotheses and generalizations regarding the evolution of parasitism in metazoans. For example, the hypothesis that the ability of parasites to colonize new hosts is dependent on the degree of host specialization potentially explains the observed disparity in phylogenetic conservation in Acanthocephala with regard to the diversity of arthropod and vertebrate hosts parasitized (Fig. 4). The generalization that parasites are simple and degenerative when compared to closely related free-living taxa can only be tested by comparing the amount and type of character changes within parasitic lineages and their free-living sister groups (Brooks and McLennan, 1993
). Significant amounts of character loss versus character innovation is expected if the evolution of parasitism in Acanthocephala is truly "degenerative." Similarly, the hypothesis that parasitic lineages exhibit elevated levels of adaptive plasticity in morphology can be tested by detecting significantly higher levels of morphological homoplasy in Acanthocephala versus its free-living sister taxon (Brooks and McLennan, 1993
). Future phylogenetic investigations of Acanthocephala will provide a historical framework to examine these hypotheses and possibly illuminate evolutionary biology to the processes involved with the origin and evolution of obligate parasitism.
| ACKNOWLEDGMENTS |
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Guidance and encouragement for my research involving acanthocephalans has been provided by Steven A. Nadler. Sabrina E. Russo assisted with the figures and provided valuable editorial comments on the manuscript. Support and facilities were provided by the Center for Population Biology at the University of California, Davis. D. W. T. Crompton and two anonymous reviewers provided insightful criticism on the manuscript. I would like to thank James R. Garey for organizing this enriching symposium.
| FOOTNOTES |
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1 From the Symposium Lesser-Known Protostome Taxa: Evolution, Development, and Ecology presented at the Annual Meeting of the Society for Integrative and Comparative Biology, 37 January 2001, at Chicago, Illinois.
2 E-mail: tjnear{at}ucdavis.edu ![]()
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+ I model of sequence evolution. ln L = 26,224.40,
= 0.5969, I = 0.1322. Numbers in bold represent percent recovery in bootstrap analysis (100 pseudoreplicates). Quotation marks indicate nonmonophyletic taxa